We have a weekly journal club on topics broadly related to NLP, clinical phenotyping, and genome-phenome discovery. The seminar is open to all DBMI students, postdocs, and faculty who are interested. The goal of this seminar is to discuss current topics and papers, and provide a "works in progress" forum for feedback on research. Please contact us if you are interested in presenting a topic.
The journal club is held on Eskind Biomedical Library, room 456, at noon on fridays.
| Date | Presenter | Topic |
|---|---|---|
| 9/24 | Min Jiang | 2010 i2b2 NLP challenge |
| 10/1 | Canceled | |
| 10/8 | Hua Xu | detecting colorectal cancer patients from EMR |
| 10/15 | Mei Liu | drug exposure modeling in EMR |
| 10/22 | Yukun Chen |
active learning for clinical text (1) Active Learning Literature Survey, Burr Settles: http://www.cs.cmu.edu/~bsettles/pub/settles.activelearning.pdf (2) Study of Active Learning in the Challenge, Yukun Chen and Subramani Mani: http://www.dsl-lab.org/yukun/ALC_WCCI2010.pdf (3) Active Learning for Unbalanced Data in the Challenge with Multiple Models and Biasing, Yukun Chen and Subramani Mani: http://www.dsl-lab.org/yukun/ALC_W&CP2010.pdf |
| 10/29 | Firas Wehbe | Machine Learning Filters for Retrieving Molecular Medicine Publications |
| 11/5 | Glenn Gobbel | Automated Annotation through Machine Learning |
| 11/12 | Samir E.AdbelRahman | Parsing |
| 11/19 | Ruth Reeves | TBA |
| 11/26 | Canceled | |
| 12/3 | Josh Denny | PheWAS |
| 12/10 | Lisa Bastarache | extracting race from EMRs |